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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907892.1_cds_XP_016458004.1_51672
CDS Infomation

[gene=LOC107781759] [db_xref=GeneID:107781759] [protein=E3 ubiquitin-protein ligase SGR9, amyloplastic-like] [protein_id=XP_016458004.1] [location=join(21474..22057,22288..22609)] [gbkey=CDS]
Sequence

ATGTTCCAAAAAACTCAATCCATAATAATGGAAGATCAAAAACACTTGGAATCCATAATC
ATGGCAGCTCTTTCTACGTTAACCCCTTTGCAACTCACAAATCTAAATCACTATTCCTCC
TCCCTCTACCACCGTTACCACCGCCGTATTTTCTCTCTCCTCTCTTCTCCCACCCTTTTC
TCTCTCACTCTCCACTACCTCAACTCCCTCTCTCTCCACCATAAATTCGTCCTCATCGCC
TGTCACCTCTTGTCAAAACTCGCAATTTTGGTATACTTCATGCAAAAAAAGACAATTTTG
CCCCCACCCACGACCACCACCATGAATCTCCGGGACTTAGACGCAGTTCTCCTCCTCCTA
CTCCTCTGTGAACTGCGCCAACATGAACCTGGGGCACTTGATGCCCCACCATCGCATTGG
CGCGATATCCTATGTGACTATGTAGCCCAGGACATGTTGAAACTATCTAGCATTGAAAGT
TCTAAAAGTGACGTCATAATCAAGTTCGTTGAGCTAGTCGCAAAGTGCAAGAATTTTGTC
AATGTTATGGCCTATGATGTTGTTGAATTCGGGCGGAGCTCCAGAATTCTCGACTCTGCC
ACTGGTGGTGAAGGAAAAGATAGCAAGAAGTTAGCGACATCCGTTGCGGTGGTGGTGGCG
CTGCCGTCAGTGGAAGTGTTGAGTGGCAGTGAAAGGGAATGTGTGATATGCAAAGAAGAG
ATGAGAGAAGGCAGAGATGTTTGCAAATTACCATGTGATCATATTTTTCATTGGAAATGT
ATACTACCTTGGTTGAAGAAGATGAATACTTGTCCATGTTGCCGGTTTCAGCTGCCGTCC
GATGATGTTTTGGCTGAAATTCAACGGTTGTGGGAAATGCTAGCCAAGATGAGTGGTGCT
ACGTAG

Peptide Sequence

PEP ID

XP_016458004.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase SGR9, amyloplastic-like [Nicotiana tabacum]
Sequence

MFQKTQSIIMEDQKHLESIIMAALSTLTPLQLTNLNHYSSSLYHRYHRRIFSLLSSPTLF
SLTLHYLNSLSLHHKFVLIACHLLSKLAILVYFMQKKTILPPPTTTTMNLRDLDAVLLLL
LLCELRQHEPGALDAPPSHWRDILCDYVAQDMLKLSSIESSKSDVIIKFVELVAKCKNFV
NVMAYDVVEFGRSSRILDSATGGEGKDSKKLATSVAVVVALPSVEVLSGSERECVICKEE
MREGRDVCKLPCDHIFHWKCILPWLKKMNTCPCCRFQLPSDDVLAEIQRLWEMLAKMSGA
T

Transcript Sequence

Gene sequence data has not been registered.